diagnosticSensitivity: diagnosticSensitivity

In tbep-tech/tbepRSparrow: RSPARROW: An R system for SPARROW modeling

Description

Calculates the parameter sensitivities (change in load predictions for a a 1 unit change in the explanatory variables). Outputs plots to ~/estimate/(run_id)_diagnostic_sensitivity.pdf. Outputs sensitivities.list as binary file to ~/estimate/(run_id)_sensitivities.list.

Executed By: estimate.R
Executes Routines:

• named.list.R

• predictSensitivity.R

• unPackList.R

Usage

diagnosticSensitivity(file.output.list, classvar, estimate.list,
  DataMatrix.list, SelParmValues, reach_decay_specification,
  reservoir_decay_specification, subdata, sitedata.demtarea.class)

Arguments

classvar	character vector of user specified spatially contiguous discrete classification variables from sparrow_control. First element is reach classification variable.
SelParmValues	selected parameters from parameters.csv using condition ifelse((parmMax > 0 | (parmType=="DELIVF" & parmMax>=0)) & (parmMin<parmMax) & ((parmType=="SOURCE" & parmMin>=0) | parmType!="SOURCE")
reach_decay_specification	the SAS IML reach decay function code from sparrow_control
reservoir_decay_specification	the SAS IML reservoir decay function code from sparrow_control
subdata	data.frame input data (subdata)

tbep-tech/tbepRSparrow documentation built on Oct. 9, 2020, 6:24 a.m.