Files in tbep-tech/tbepRSparrow
RSPARROW: An R system for SPARROW modeling
.Rbuildignore
.Rhistory
.gitignore
DESCRIPTION
NAMESPACE
R/accumulateIncrArea.R
R/addMarkerText.R
R/addVars.R
R/allowRemoveRow.R
R/applyUserModify.R
R/areColors.R
R/assignIncremSiteIDs.R
R/calcClassLandusePercent.R
R/calcDemtareaClass.R
R/calcHeadflag.R
R/calcIncremLandUse.R
R/calcTermflag.R
R/checkAnyMissingSubdataVars.R
R/checkBinaryMaps.R
R/checkClassificationVars.R
R/checkData1NavigationVars.R
R/checkDrainageareaErrors.R
R/checkDrainageareaErrors.Rmd
R/checkDrainageareaErrorsChild.Rmd
R/checkDrainageareaMapPrep.R
R/checkDupVarnames.R
R/checkMissingData1Vars.R
R/checkMissingSubdataVars.R
R/checkingMissingVars.R
R/compileALL.R
R/compileInput.R
R/controlFileTasksModel.R
R/convertHotTables.R
R/copyPriorModelFiles.R
R/correlationMatrix.R
R/createDataMatrix.R
R/createDirs.R
R/createInitialDataDictionary.R
R/createInitialParameterControls.R
R/createInteractiveChoices.R
R/createMasterDataDictionary.R
R/createRTables.R
R/createSubdataSorted.R
R/createVerifyReachAttr.R
R/dataInputPrep.R
R/deleteFiles.R
R/diagnosticClassLandChild.Rmd
R/diagnosticClassvarChild.Rmd
R/diagnosticContiguousChild.Rmd
R/diagnosticCorrChild.Rmd
R/diagnosticDiagMapChild.Rmd
R/diagnosticMapAttrChild.Rmd
R/diagnosticMaps.R
R/diagnosticPlotsNLLS.R
R/diagnosticPlotsNLLS.Rmd
R/diagnosticPlotsValidate.R
R/diagnosticSensParamChild.Rmd
R/diagnosticSensitivity.R
R/diagnosticSensitivity.Rmd
R/diagnosticSpatialAutoCorr.R
R/diagnosticSpatialAutoCorr.Rmd
R/dropFunc.R
R/eigensort.R
R/errorOccurred.R
R/estimate.R
R/estimateBootstraps.R
R/estimateFeval.R
R/estimateFevalNoadj.R
R/estimateNLLSmetrics.R
R/estimateNLLStable.R
R/estimateOptimize.R
R/estimateWeightedErrors.R
R/executeRSPARROW.R
R/executionTree.R
R/findCodeStr.R
R/findControlFiles.R
R/findMinMaxLatLon.R
R/findScriptName.R
R/fixDupLatLons.R
R/generateInputLists.R
R/getCharSett.R
R/getNumSett.R
R/getOptionSett.R
R/getShortSett.R
R/getSpecialSett.R
R/getVarList.R
R/getYesNoSett.R
R/goShinyPlot.R
R/handsOnMod.R
R/handsOnUI.R
R/hydseq.R
R/hydseqTerm.R
R/importCSVcontrol.R
R/isScriptSaved.R
R/makePaths.R
R/mapBreaks.R
R/mapSiteAttributes.R
R/modelCompare.R
R/named.list.R
R/openDesign.R
R/openParameters.R
R/openVarnames.R
R/outputSettings.R
R/plotlyLayout.R
R/predict.R
R/predictBoot.R
R/predictBootsOutCSV.R
R/predictBootstraps.R
R/predictMaps.R
R/predictMaps.Rmd
R/predictOutCSV.R
R/predictScenarios.R
R/predictScenariosOutCSV.R
R/predictScenariosPrep.R
R/predictSensitivity.R
R/predictSummaryOutCSV.R
R/readData.R
R/readDesignMatrix.R
R/readParameters.R
R/read_dataDictionary.R
R/removeObjects.R
R/replaceData1Names.R
R/replaceNAs.R
R/runBatchShiny.R
R/runRsparrow.R
R/selectAll.R
R/selectCalibrationSites.R
R/selectDesignMatrix.R
R/selectParmValues.R
R/selectValidationSites.R
R/setMapDefaults.R
R/setNLLSWeights.R
R/setupMaps.R
R/shapeFunc.R
R/shinyErrorTrap.R
R/shinyMap2.R
R/shinySavePlot.Rmd
R/shinyScenarios.R
R/shinyScenariosMod.R
R/shinySiteAttr.R
R/sourceRedFunc.R
R/startEndmodifySubdata.R
R/startModelRun.R
R/streamCatch.R
R/sumIncremAttributes.R
R/syncVarNames.R
R/testCosmetic.R
R/testRedTbl.R
R/testSettings.R
R/unPackList.R
R/updateVariable.R
R/validCosmetic.R
R/validateFevalNoadj.R
R/validateMetrics.R
R/verifyDemtarea.R
README.md
batch/batch.RData
batch/batchGeoLines.R
batch/batchMaps.R
batch/batchRun.R
batch/batchlineShape.R
batch/batchpolyShape.R
batch/interactiveBatch.RData
batch/interactiveBatchRun.R
batch/shinyBatch.R
batch/shinyBatch.RData
inst/sas/import_data1.sas
inst/sas/output_SAS_labels.sas
inst/tables/funcTypes.csv
inst/tables/functionDescriptions.csv
inst/tables/functionParameters.csv
inst/tables/functionReturns.csv
man/accumulateIncrArea.Rd
man/addVars.Rd
man/allowRemoveRow.Rd
man/applyUserModify.Rd
man/areColors.Rd
man/assignIncremSiteIDs.Rd
man/calcClassLandusePercent.Rd
man/calcDemtareaClass.Rd
man/calcHeadflag.Rd
man/calcIncremLandUse.Rd
man/calcTermflag.Rd
man/checkAnyMissingSubdataVars.Rd
man/checkBinaryMaps.Rd
man/checkClassificationVars.Rd
man/checkData1NavigationVars.Rd
man/checkDrainageareaErrors.Rd
man/checkDupVarnames.Rd
man/checkMissingData1Vars.Rd
man/checkMissingSubdataVars.Rd
man/checkingMissingVars.Rd
man/compileALL.Rd
man/compileInput.Rd
man/controlFileTasksModel.Rd
man/convertHotTables.Rd
man/copyPriorModelFiles.Rd
man/correlationMatrix.Rd
man/createDataMatrix.Rd
man/createDirs.Rd
man/createInitialDataDictionary.Rd
man/createInitialParameterControls.Rd
man/createInteractiveChoices.Rd
man/createMasterDataDictionary.Rd
man/createRTables.Rd
man/createSubdataSorted.Rd
man/createVerifyReachAttr.Rd
man/dataInputPrep.Rd
man/deleteFiles.Rd
man/diagnosticMaps.Rd
man/diagnosticPlotsNLLS.Rd
man/diagnosticPlotsValidate.Rd
man/diagnosticSensitivity.Rd
man/diagnosticSpatialAutoCorr.Rd
man/dropFunc.Rd
man/eigensort.Rd
man/errorOccurred.Rd
man/estimate.Rd
man/estimateBootstraps.Rd
man/estimateFeval.Rd
man/estimateFevalNoadj.Rd
man/estimateNLLSmetrics.Rd
man/estimateNLLStable.Rd
man/estimateOptimize.Rd
man/estimateWeightedErrors.Rd
man/executeRSPARROW.Rd
man/executionTree.Rd
man/findCodeStr.Rd
man/findControlFiles.Rd
man/findMinMaxLatLon.Rd
man/findScriptName.Rd
man/fixDupLatLons.Rd
man/generateInputLists.Rd
man/getCharSett.Rd
man/getNumSett.Rd
man/getOptionSett.Rd
man/getShortSett.Rd
man/getSpecialSett.Rd
man/getVarList.Rd
man/getYesNoSett.Rd
man/goShinyPlot.Rd
man/handsOnMod.Rd
man/handsOnUI.Rd
man/hydseq.Rd
man/hydseqTerm.Rd
man/importCSVcontrol.Rd
man/installPackages.Rd
man/isScriptSaved.Rd
man/makePaths.Rd
man/mapBreaks.Rd
man/mapSiteAttributes.Rd
man/modelCompare.Rd
man/named.list.Rd
man/openDesign.Rd
man/openParameters.Rd
man/openVarnames.Rd
man/outputSettings.Rd
man/predict.Rd
man/predictBoot.Rd
man/predictBootsOutCSV.Rd
man/predictBootstraps.Rd
man/predictMaps.Rd
man/predictOutCSV.Rd
man/predictScenarios.Rd
man/predictScenariosOutCSV.Rd
man/predictScenariosPrep.Rd
man/predictSensitivity.Rd
man/predictSummaryOutCSV.Rd
man/readData.Rd
man/readDesignMatrix.Rd
man/readParameters.Rd
man/read_dataDictionary.Rd
man/removeObjects.Rd
man/replaceData1Names.Rd
man/replaceNAs.Rd
man/runShiny.Rd
man/selectAll.Rd
man/selectCalibrationSites.Rd
man/selectDesignMatrix.Rd
man/selectParmValues.Rd
man/selectValidationSites.Rd
man/setMapDefaults.Rd
man/setNLLSWeights.Rd
man/setupMaps.Rd
man/shapeFunc.Rd
man/shinyErrorTrap.Rd
man/shinyMap2.Rd
man/shinyScenarios.Rd
man/shinyScenariosMod.Rd
man/shinySiteAttr.Rd
man/sourceRedFunc.Rd
man/startEndmodifySubdata.Rd
man/startModelRun.Rd
man/streamCatch.Rd
man/sumIncremAttributes.Rd
man/syncVarNames.Rd
man/testCosmetic.Rd
man/testRedTbl.Rd
man/testSettings.Rd
man/unPackList.Rd
man/updateVariable.Rd
man/validCosmetic.Rd
man/validSetting.Rd
man/validateFevalNoadj.Rd
man/validateMetrics.Rd
man/verifyDemtarea.Rd
src/deliv_fraction.dll
src/deliv_fraction.for
src/mptnoder.dll
src/mptnoder.for
src/ptnoder.dll
src/ptnoder.for
src/sites_incr.dll
src/sites_incr.for
src/sum_atts.dll
src/sum_atts.for
src/tnoder.dll
src/tnoder.for
tbepRSparrow.Rproj
vignettes/RSPARROW_vignette.Rmd
vignettes/RSPARROW_vignette.pdf
