shinyMap2: shinyMap2

In tbep-tech/tbepRSparrow: RSPARROW: An R system for SPARROW modeling

Description

Modular Shiny app that allows the user to interactively generate Stream, Catchment, and Site Attribute maps, as well as execute Source Change Scenarios Uses libraries shiny, sp, data.table, maptools, rgdal, shinyWidgets, stringr, and rhandsontable Uses subroutines: setup routines : createInteractiveChoices, createInteractiveScenarioChoices, createRTables, UIs : streamCatch, shinySiteAttr, shinyScenarios MODS : compileALL, selectAll, updateVariable, shinyScenariosMod, goShinyPlot

Executed By:

• runShiny.R

• startModelRun.R

Executes Routines:

• compileALL.R

• createInteractiveChoices.R

• createRTables.R

• goShinyPlot.R

• handsOnMod.R

• selectAll.R

• shapeFunc.R

• shinyScenarios.R

• shinyScenariosMod.R

• shinySiteAttr.R

• streamCatch.R

• testCosmetic.R

• testRedTbl.R

• unPackList.R

• updateVariable.R

• validCosmetic.R

Usage

shinyMap2(file.output.list, map_uncertainties, BootUncertainties,
  data_names, mapping.input.list, subdata, SelParmValues, sitedata,
  estimate.list, ConcFactor, DataMatrix.list, dlvdsgn,
  reach_decay_specification, reservoir_decay_specification,
  scenario.input.list, add_vars, batch_mode, RSPARROW_errorOption)

Arguments

map_uncertainties	Vector of user selected uncertainty parameters to map, if uncertainty analysis was not run NA
BootUncertainties	Uncertainty values if available, if uncertainty analysis was not run NA
data_names	data.frame of variable metadata from data_Dictionary.csv file
subdata	data.frame input data (subdata)
SelParmValues	selected parameters from parameters.csv using condition ifelse((parmMax > 0 | (parmType=="DELIVF" & parmMax>=0)) & (parmMin<parmMax) & ((parmType=="SOURCE" & parmMin>=0) | parmType!="SOURCE")
sitedata	Sites selected for calibration using subdata[(subdata$depvar > 0), ]
ConcFactor	the concentration conversion factor, computed as Concentration = load / discharge * ConcFactor
dlvdsgn	design matrix imported from design_matrix.csv
reach_decay_specification	the SAS IML reach decay function code from sparrow_control
reservoir_decay_specification	the SAS IML reservoir decay function code from sparrow_control
add_vars	additional variables specified by the setting add_vars to be included in prediction, yield, and residuals csv and shape files
batch_mode	yes/no character string indicating whether RSPARROW is being run in batch mode
RSPARROW_errorOption

Value

outshinyInput the Shiny Input list with hottables as dataframes and cosmetic mapping settings as list objects

tbep-tech/tbepRSparrow documentation built on Oct. 9, 2020, 6:24 a.m.