extract-methods: Extraction of subsets of data from CytoCompare objects

In tchitchek-lab/CytoCompare: Computational comparisons of cytometry profiles

Description

Extracts subsets of CELL, CLUSTER, GATE, MWEIGHTS or RES object.

Usage

## S4 method for signature 'CLUSTER,ANY'
x[i, j]

## S4 method for signature 'MWEIGHTS,ANY'
x[i]

## S4 method for signature 'RES,ANY'
x[i]

Arguments

x	a CELL, CLUSTER, GATE, MWEIGHTS or RES object
i	a numeric, logical or character vector
j	a numeric, logical or character vector

Details

For cytometry objects (CELL, CLUSTER, or GATE objects), the parameter 'i' represents a vector of profiles to extract and the parameter 'j' represents a vector of markers to extract.

For MWEIGHTS objects, the parameter 'i' represents a vector of markers to extract.

For RES objects, the parameter 'i' represents a vector of comparisons to extract.

Value

a S4 object of class CELL, CLUSTER, GATE, MWEIGHTS or RES

tchitchek-lab/CytoCompare documentation built on May 31, 2019, 7:29 a.m.