assignContext-methods: Assignement of a context into a 'Results' object

In tchitchek-lab/SPADEVizR: SPADEVizR: an R package for Visualization, Analysis and Integration of SPADE results

Assignement of a context into a 'Results' object

Description

This function allows to assigns three kinds of contextual information to samples: biological condition, timepoints and individuals.

Usage

assignContext(Results, assignments)

## S4 method for signature 'Results'
assignContext(Results, assignments)

Arguments

Results	a Results or Results object
assignments	a data.frame containing all samples names (in rownames) and columns providing contextual associations like "bc" (biological conditions), "tp" (biological conditions) and "ind" (individuals)

Details

The order of rownames (sample names) in this assignments dataframe will be the display order of the elements.

Value

none

tchitchek-lab/SPADEVizR documentation built on Jan. 27, 2024, 8:58 p.m.