barplotInsertSizes: Bar plot of insert sizes

In timflutre/rutilstimflutre: Timothee Flutre's personal R code

Bar plot of insert sizes

Description

Creates a bar plot with vertical bars of insert sizes from histogram data as calculated by the CollectInsertSizeMetrics program from the Picard software.

Usage

barplotInsertSizes(file, main = NULL, add.text = FALSE)

Arguments

file	path to the output file from java -jar picard.jar CollectInsertSizeMetrics
main	overall title for the plot
add.text	add total count, as well as Q25, median and Q75 for insert sizes, to the topright of the plot

Value

invisible data frame of the content of the file

Author(s)

Timothee Flutre

timflutre/rutilstimflutre documentation built on Feb. 7, 2024, 8:17 a.m.