countGenotypicClasses: Genotypic classes
In timflutre/rutilstimflutre: Timothee Flutre's personal R code
countGenotypicClasses R Documentation
Genotypic classes
Description
Count the genotypic classes per SNP (not imputed, i.e. 0, 1, 2 and NA).
Usage
countGenotypicClasses(X)
Arguments
X
matrix of bi-allelic SNP genotypes encoded in allele doses in 0,1,2, with genotypes in rows and SNPs in columns; missing values should be encoded as NA
Value
matrix with 4 columns and as many rows as there are SNPs
Author(s)
Timothee Flutre
timflutre/rutilstimflutre documentation built on Feb. 12, 2025, 11:35 p.m.
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| countGenotypicClasses | R Documentation |
Genotypic classes
Description
Count the genotypic classes per SNP (not imputed, i.e. 0, 1, 2 and NA).
Usage
countGenotypicClasses(X)
Arguments
X |
matrix of bi-allelic SNP genotypes encoded in allele doses in 0,1,2, with genotypes in rows and SNPs in columns; missing values should be encoded as NA |
Value
matrix with 4 columns and as many rows as there are SNPs
Author(s)
Timothee Flutre
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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