confidenceGenoOneVar: Confidence in one variant's genotypes

confidenceGenoOneVarR Documentation

Confidence in one variant's genotypes

Description

Provide measure of confidence in the genotypes at a given variant.

Usage

confidenceGenoOneVar(x, plot.it = FALSE)

Arguments

x

CollapsedVCF corresponding to a SNV (see pkg VariantAnnotation)

plot.it

plot GQ=f(DP) if TRUE

Value

invisible data.frame

Author(s)

Timothee Flutre


timflutre/rutilstimflutre documentation built on Aug. 18, 2024, 7:43 p.m.