calcFreqNaVcf: Missing genotypes in VCF
In timflutre/rutilstimflutre: Timothee Flutre's personal R code
calcFreqNaVcf R Documentation
Missing genotypes in VCF
Description
Calculate the frequency of missing genotypes for each marker.
Usage
calcFreqNaVcf(vcf, with.coords = FALSE)
Arguments
vcf
CollapsedVCF (see pkg VariantAnnotation)
with.coords
if TRUE, a GRanges object is returned
Value
numeric vector or GRanges
Author(s)
Timothee Flutre
timflutre/rutilstimflutre documentation built on Feb. 12, 2025, 11:35 p.m.
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| calcFreqNaVcf | R Documentation |
Missing genotypes in VCF
Description
Calculate the frequency of missing genotypes for each marker.
Usage
calcFreqNaVcf(vcf, with.coords = FALSE)
Arguments
vcf |
CollapsedVCF (see pkg VariantAnnotation) |
with.coords |
if TRUE, a GRanges object is returned |
Value
numeric vector or GRanges
Author(s)
Timothee Flutre
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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