caretPredictQtl: Predict with qtl for caret

In timflutre/rutilstimflutre: Timothee Flutre's personal R code

Predict with qtl for caret

Description

Predict with qtl for caret

Usage

caretPredictQtl(modelFit, newdata, submodels = NULL)

Arguments

modelFit	model produced by caretFitQtl; should be a list with a component named "geno.effects" which contains a vector in the same order as the columns of newdata and, as values, the estimated allele effects (0 if not significant, non-zero otherwise) or genotypic class effects.
newdata	predictor values of the instances being predicted (e.g. out-of-bag samples); should be in the JoinMap format
submodels	optional list of tuning parameters only used with the "loop" element

Value

vector

Author(s)

Charlotte Brault [aut], Timothee Flutre [ctb]

timflutre/rutilstimflutre documentation built on Feb. 7, 2024, 8:17 a.m.