Description Usage Arguments Value
Compute fraction of reads without BLAST hit for each sample
1 | getNoBlastHitFraction(summary, count_table)
|
summary |
Summary table generated by mergeResults (requires BLAST result generated by runBlast) |
count_table |
A table of (normalized) sequence counts. A sequence count table can be generated by createCountTableFromFastQs and normalized by applying runDESeq2 |
A data frame with samples as row names and the column 'NA_fraction'
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