mergeSingleAndClusterResults: Merges clustering results as well as DE results for single...

Description Usage Arguments Value

Description

Merges clustering results as well as DE results for single sequence and cluster approach

Usage

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mergeSingleAndClusterResults(cl_sig_results, clust_result, sig_results,
  map)

Arguments

cl_sig_results

A data frame as created by runDESeq2. Includes DE pvalues for each cluster

clust_result

Dataframe containing clustering results as created by runClustering

sig_results

A data frame as created by runDESeq2. Includes DE pvalues for each individual sequence

map

A data frame with sequences as row names and sequence identifiers in first column. Can be generated by createMap

Value

A combined data frame which includes all pvalues and clusterIDs


timjeske/DEUS documentation built on June 6, 2019, 12:59 p.m.