getSelectedEdges: getSelectedEdges

In tmuetze/Bioconductor_RCy3_the_new_RCytoscape: Display and manipulate graphs in Cytoscape >= 3.3.0

Description

Retrieve the identifiers of all the edges selected in the current graph.

Usage

getSelectedEdges(obj)

Arguments

obj	a CytoscapeWindowClass object.

Value

A list of character strings.

Author(s)

Tanja Muetze, Georgi Kolishovski, Paul Shannon

Examples

  ## Not run: 
  # first, delete existing windows to save memory:
  deleteAllWindows(CytoscapeConnection())

  cw <- CytoscapeWindow ('getSelectedEdges.test', graph=makeSimpleGraph())
  displayGraph (cw)
  layoutNetwork(cw, 'force-directed')
  redraw (cw)
    # in Cytoscape, interactively select an edge or call the selectEdges function
  selectEdges (cw, "A (phosphorylates) B")
  getSelectedEdges (cw)
    # [1] "A (phosphorylates) B"

## End(Not run)

tmuetze/Bioconductor_RCy3_the_new_RCytoscape documentation built on May 31, 2019, 4:39 p.m.