getSelectedNodes: getSelectedNodes

In tmuetze/Bioconductor_RCy3_the_new_RCytoscape: Display and manipulate graphs in Cytoscape >= 3.3.0

Description

Retrieve the names of all the nodes selected in the current graph.

Usage

getSelectedNodes(obj)

Arguments

obj	a CytoscapeWindowClass object.

Value

A list of character strings.

Author(s)

Tanja Muetze, Georgi Kolishovski, Paul Shannon

Examples

  ## Not run: 
  # first, delete existing windows to save memory:
  deleteAllWindows(CytoscapeConnection())

  cw <- CytoscapeWindow ('getSelectedNodes.test', graph=makeSimpleGraph())
  displayGraph (cw)
  layoutNetwork(cw, 'force-directed')
  redraw (cw)
    # in Cytoscape, interactively select two nodes, or call selectNodes
  selectNodes (cw, c ('A','B'))
  getSelectedNodes (cw)
  # [1] "A" "B"

## End(Not run)

tmuetze/Bioconductor_RCy3_the_new_RCytoscape documentation built on May 31, 2019, 4:39 p.m.