hideNodes: hideNodes

In tmuetze/Bioconductor_RCy3_the_new_RCytoscape: Display and manipulate graphs in Cytoscape >= 3.3.0

Description

Hide (but do not delete) nodes. Highly recommended: save the current layout before hiding, since 'unhideAll' will, in addition to restoring hidden nodes to view, will place then in unpredictable locations on the screen.

Usage

hideNodes(obj, node.names)

Arguments

obj	a CytoscapeWindowClass object.
node.names	a character list object.

Value

None.

Author(s)

Tanja Muetze, Georgi Kolishovski, Paul Shannon

See Also

hideSelectedNodes unhideAll saveLayout restoreLayout

Examples

  ## Not run: 
  # first, delete existing windows to save memory:
  deleteAllWindows(CytoscapeConnection())

  cw <- CytoscapeWindow ('hideNodes.test', graph=makeSimpleGraph())
  displayGraph(cw)
  redraw (cw)
  layoutNetwork(cw, 'force-directed')
  saveLayout (cw, 'layout.tmp.RData')
  hideNodes (cw, c ('A', 'B'))
  unhideAll (cw)
  restoreLayout (cw, 'layout.tmp.RData')

## End(Not run)

tmuetze/Bioconductor_RCy3_the_new_RCytoscape documentation built on May 31, 2019, 4:39 p.m.