setEdgeLabelRule: setEdgeLabelRule

In tmuetze/Bioconductor_RCy3_the_new_RCytoscape: Display and manipulate graphs in Cytoscape >= 3.3.0

Description

Specify the edge attribute to be used as the label displayed on each edge. Non-character attributes are converted to strings before they are used.

Usage

setEdgeLabelRule(obj, edge.attribute.name, vizmap.style.name = 'default')

Arguments

obj	a CytoscapeWindowClass object.
edge.attribute.name	the edge attribute whose values will determine the edge label on each edge, when this rule is applied.
vizmap.style.name	visual style name, defaults to the style 'default'.

Value

None.

Author(s)

Tanja Muetze, Georgi Kolishovski, Paul Shannon

See Also

setNodeBorderColorRule (detailed example) setEdgeColorRule

Examples

  ## Not run: 
  # first, delete existing windows to save memory:
  deleteAllWindows(CytoscapeConnection())

  cw <- CytoscapeWindow ('setEdgeLabelRule.test', graph=makeSimpleGraph())
  displayGraph (cw)
  layoutNetwork (cw, 'force-directed')
  setEdgeLabelRule (cw, 'edgeType')

## End(Not run)

tmuetze/Bioconductor_RCy3_the_new_RCytoscape documentation built on May 31, 2019, 4:39 p.m.