setEdgeSourceArrowShapeDirect: setEdgeSourceArrowShapeDirect

In tmuetze/Bioconductor_RCy3_the_new_RCytoscape: Display and manipulate graphs in Cytoscape >= 3.3.0

Description

In the specified CytoscapeWindow, set the source arrow shape of the specified edge or edges, using one of the supported shapes.

Usage

setEdgeSourceArrowShapeDirect(obj, edge.names, new.values)

Arguments

obj	a CytoscapeWindowClass object.
edge.names	one or more cy2-style edge names, String objects.
new.values	one or more String objects, from the supported set.

Value

None.

Author(s)

Tanja Muetze, Georgi Kolishovski, Paul Shannon

See Also

getArrowShapes setEdgeTargetArrowRule setDefaultEdgeSourceArrowColor setEdgeSourceArrowColorDirect setEdgeSourceArrowColorRule setEdgeSourceArrowRule setEdgeSourceArrowShapeDirect setEdgeTargetArrowColorDirect setEdgeTargetArrowColorRule setEdgeTargetArrowRule setEdgeTargetArrowShapeDirect setDefaultEdgeTargetArrowColor

Examples

  ## Not run: 
  # first, delete existing windows to save memory:
  deleteAllWindows(CytoscapeConnection())

  cw <- CytoscapeWindow ('setEdgeSourceArrowShapeDirect.test', graph=makeSimpleGraph())
  displayGraph (cw)
  layoutNetwork (cw, 'force-directed')

  edges.of.interest <- as.character (cy2.edge.names (cw@graph))
  supported.arrow.shapes <- getArrowShapes (cw)

    # first try passing three edges and three arrow shapes
  setEdgeSourceArrowShapeDirect (cw, edges.of.interest, supported.arrow.shapes [2:4])
  
    # now try passing three edges and one arrow.shapes
  setEdgeSourceArrowShapeDirect (cw, edges.of.interest, supported.arrow.shapes [6])

    # restore the default
  setEdgeSourceArrowShapeDirect (cw, edges.of.interest, 'NONE')

## End(Not run)

tmuetze/Bioconductor_RCy3_the_new_RCytoscape documentation built on May 31, 2019, 4:39 p.m.