run_CAT: This function runs CAT on input contigs and creates the...
In uashogeschoolutrecht/structural_colours: Package For Project Structural Colour
Description
This function runs CAT on input contigs and creates the output dir at specified location. Database download included.
Usage
1
run_CAT(samples_dir, contigpath, outname)
Arguments
samples_dir
Absolute path to samples directory
contigpath
Absolute path to the contigs fasta file
outname
Basename for folder with output files
uashogeschoolutrecht/structural_colours documentation built on June 20, 2020, 4:07 p.m.
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Description
This function runs CAT on input contigs and creates the output dir at specified location. Database download included.
Usage
1 | run_CAT(samples_dir, contigpath, outname)
|
Arguments
samples_dir |
Absolute path to samples directory |
contigpath |
Absolute path to the contigs fasta file |
outname |
Basename for folder with output files |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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