run_prokka: Script to activate and run prokka on metagenome

Description Usage Arguments

View source: R/run_prokka.R

Description

Script to activate and run prokka on metagenome

Usage

1
run_prokka(prokka_script, contigpath, outdir, prefix)

Arguments

prokka_script

Path to prokka.sh, "inst/prokka.sh"

contigpath

Path to contigs file

outdir

Output directory

prefix

Name for output files


uashogeschoolutrecht/structural_colours documentation built on June 20, 2020, 4:07 p.m.