ezTranscriptDbFromRef: Gets the transcripts database from the reference
In uzh/ezRun: An R meta-package for the analysis of Next Generation Sequencing Data
ezTranscriptDbFromRef R Documentation
Gets the transcripts database from the reference
Description
Gets the transcripts database from the reference.
Usage
ezTranscriptDbFromRef(reference, dataSource = "FGCZ")
Arguments
reference
a reference to read the information from.
dataSource
a character specifying the source of the data.
Value
Returns an object of the class TxDb
Author(s)
Rehrauer, Hubert
Schmid, Peter
See Also
makeTxDbFromGFF
Examples
refBuild = "Mus_musculus/UCSC/mm10/Annotation/Version-2012-05-23"
param = ezParam(list(refBuild=refBuild))
tdb = ezTranscriptDbFromRef(param$ezRef)
uzh/ezRun documentation built on April 24, 2024, 4:01 p.m.
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| ezTranscriptDbFromRef | R Documentation |
Gets the transcripts database from the reference
Description
Gets the transcripts database from the reference.
Usage
ezTranscriptDbFromRef(reference, dataSource = "FGCZ")
Arguments
reference |
a reference to read the information from. |
dataSource |
a character specifying the source of the data. |
Value
Returns an object of the class TxDb
Author(s)
Rehrauer, Hubert
Schmid, Peter
See Also
makeTxDbFromGFF
Examples
refBuild = "Mus_musculus/UCSC/mm10/Annotation/Version-2012-05-23"
param = ezParam(list(refBuild=refBuild))
tdb = ezTranscriptDbFromRef(param$ezRef)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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