ezUtrSequences: Gets UTR sequences
In uzh/ezRun: An R meta-package for the analysis of Next Generation Sequencing Data
ezUtrSequences R Documentation
Gets UTR sequences
Description
Gets sequences from untranslated regions.
Usage
ezUtrSequences(gtf, chromSeqs)
Arguments
gtf
the annotation data.frame to get the gene data from.
chromSeqs
the chromosome sequences to get the Views from.
Value
Returns a list with two objects of the class DNAStringSet from the packages Biostrings that represent the 3 and 5 primer.
Author(s)
Rehrauer, Hubert
Schmid, Peter
See Also
DNAStringSet
Views
reverseComplement
uzh/ezRun documentation built on April 19, 2024, 8:25 a.m.
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| ezUtrSequences | R Documentation |
Gets UTR sequences
Description
Gets sequences from untranslated regions.
Usage
ezUtrSequences(gtf, chromSeqs)
Arguments
gtf |
the annotation data.frame to get the gene data from. |
chromSeqs |
the chromosome sequences to get the Views from. |
Value
Returns a list with two objects of the class DNAStringSet from the packages Biostrings that represent the 3 and 5 primer.
Author(s)
Rehrauer, Hubert
Schmid, Peter
See Also
DNAStringSet
Views
reverseComplement
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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