getRangeValues: Gets the values of genomic ranges
In uzh/ezRun: An R meta-package for the analysis of Next Generation Sequencing Data
getRangeValues R Documentation
Gets the values of genomic ranges
Description
Gets the values of genomic ranges
Usage
getRangeValues(
cov,
targetRanges,
doRev = as.character(strand(targetRanges)) == "-",
asMatrix = TRUE
)
Arguments
cov
an object of the class RleList.
targetRanges
an object of the class GRanges.
doRev
a logical vector indicating whether to reverse ranges. Usually derived from targetRanges.
asMatrix
a logical indicating whether to return the values as a matrix.
Value
Returns the values or a matrix containing them.
Author(s)
Rehrauer, Hubert
Schmid, Peter
See Also
RleViewsList
viewApply
uzh/ezRun documentation built on Dec. 26, 2024, 9:53 a.m.
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| getRangeValues | R Documentation |
Gets the values of genomic ranges
Description
Gets the values of genomic ranges
Usage
getRangeValues(
cov,
targetRanges,
doRev = as.character(strand(targetRanges)) == "-",
asMatrix = TRUE
)
Arguments
cov |
an object of the class RleList. |
targetRanges |
an object of the class GRanges. |
doRev |
a logical vector indicating whether to reverse ranges. Usually derived from |
asMatrix |
a logical indicating whether to return the values as a matrix. |
Value
Returns the values or a matrix containing them.
Author(s)
Rehrauer, Hubert
Schmid, Peter
See Also
RleViewsList
viewApply
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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