gffToRanges: Gets GRanges from annotation
In uzh/ezRun: An R meta-package for the analysis of Next Generation Sequencing Data
gffToRanges R Documentation
Gets GRanges from annotation
Description
Gets GRanges from annotation of the format gtf or gff.
Usage
gffToRanges(gff)
Arguments
gff
the annotation data.frame to get the GRanges from.
Value
Returns a GRanges object
Author(s)
Rehrauer, Hubert
Schmid, Peter
See Also
GRanges
Examples
param = ezParam()
gtf = ezLoadFeatures(param, system.file("extdata/genes.gtf", package="ezRun", mustWork=TRUE))
gRanges = gffToRanges(gtf)
gRanges
uzh/ezRun documentation built on April 24, 2024, 4:01 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| gffToRanges | R Documentation |
Gets GRanges from annotation
Description
Gets GRanges from annotation of the format gtf or gff.
Usage
gffToRanges(gff)
Arguments
gff |
the annotation data.frame to get the GRanges from. |
Value
Returns a GRanges object
Author(s)
Rehrauer, Hubert
Schmid, Peter
See Also
GRanges
Examples
param = ezParam()
gtf = ezLoadFeatures(param, system.file("extdata/genes.gtf", package="ezRun", mustWork=TRUE))
gRanges = gffToRanges(gtf)
gRanges
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.