connect_classes: connect ontological categories between related, annotated...
In vjcitn/ontoProc: processing of ontologies of anatomy, cell lines, and so on
View source: R/connect_classes.R
connect_classes R Documentation
connect ontological categories between related, annotated SummarizedExperiments
Description
connect ontological categories between related, annotated SummarizedExperiments
Usage
connect_classes(ont, se1, se2)
Arguments
ont
an ontologyIndex ontology instance
se1
SummarizedExperiment instance with 'label.ont' among colData columns
se2
SummarizedExperiment instance with 'label.ont' among colData columns
Value
a list with two sublists mapping from terms in one SE to descendant terms in the other SE
vjcitn/ontoProc documentation built on Oct. 12, 2024, 4:35 p.m.
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View source: R/connect_classes.R
| connect_classes | R Documentation |
connect ontological categories between related, annotated SummarizedExperiments
Description
connect ontological categories between related, annotated SummarizedExperiments
Usage
connect_classes(ont, se1, se2)
Arguments
ont |
an ontologyIndex ontology instance |
se1 |
SummarizedExperiment instance with 'label.ont' among colData columns |
se2 |
SummarizedExperiment instance with 'label.ont' among colData columns |
Value
a list with two sublists mapping from terms in one SE to descendant terms in the other SE
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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