owl2cache: cache an owl file accessible via URL

In vjcitn/ontoProc: processing of ontologies of anatomy, cell lines, and so on

cache an owl file accessible via URL

Description

cache an owl file accessible via URL

Usage

owl2cache(cache = BiocFileCache::BiocFileCache(), url)

Arguments

cache	BiocFileCache instance or equivalent
url	character(1)

Note

This function will check for presence of url in cache using bfcquery; if a hit is found, returns the rpath associated with the last matching record. etags can be available for use with bfcneedsupdate.

Examples

ca = BiocFileCache::BiocFileCache()
o2 = try(reticulate::import("owlready2"), silent=TRUE)
if (!inherits(o2, "try-error")) {
 hppa = owl2cache(ca, 
    url="http://purl.obolibrary.org/obo/hp/releases/2023-10-09/hp-base.owl")
 setup_entities(hppa)
}

vjcitn/ontoProc documentation built on Nov. 22, 2024, 6:11 p.m.