ontoProc: processing of ontologies of anatomy, cell lines, and so on

onto_plot2

R Documentation

high-level use of graph/Rgraphviz for rendering ontology relations

Description

high-level use of graph/Rgraphviz for rendering ontology relations

Usage

onto_plot2(ont, terms2use, cex = 0.8, ...)

Arguments

`ont`	instance of ontology from ontologyIndex
`terms2use`	character vector
`cex`	numeric(1) defaults to .8, supplied to Rgraphviz::graph.par
`...`	passed to onto_plot of ontologyPlot

Value

graphNEL instance (invisibly)

Examples

cl = getOnto("cellOnto")
cl3k = c("CL:0000492", "CL:0001054", "CL:0000236", "CL:0000625",
   "CL:0000576", "CL:0000623", "CL:0000451", "CL:0000556")
onto_plot2(cl, cl3k)

vjcitn/ontoProc documentation built on March 23, 2024, 7:23 a.m.