Files in vjcitn/ontoProc

processing of ontologies of anatomy, cell lines, and so on

.github/README.md

.github/build-products/r-bioc-ontoproc_1.25.6001-1_amd64.buildinfo

.github/build-products/r-bioc-ontoproc_1.25.6001-1_amd64.changes

.github/build-products/r-bioc-ontoproc_1.25.6001-1_amd64.deb

.github/logs/ontoProc-deb.log

.github/logs/ontoProc-debname.log

.github/scripts/make_deb.sh

.github/stage/build_all.yaml

.github/stage/build_devel_linux_single.yaml

.github/workflows/build_devel_linux_single.yaml

DESCRIPTION

GRIK3table.png

NAMESPACE

NEWS

R/CLextend.R R/CLfeats.R R/bind_formal_tags.R R/clfixer.R R/common_classes.R R/connect_classes.R R/countClasses.R R/ctmarks.R R/data.R R/dropStop.R R/fastGrep.R R/findCommonAncestors.R R/getOntos.R R/get_ordo_owl_path.R R/graphNEL.R R/mapNaive.R R/owl2cache.R R/owl_ops.R R/plot.owlents.R R/roots.R R/seurTab.R R/shiny.R R/subset_descendants.R R/sym2CellOnto.R R/termProc.R R/treeproc.R README.md

ctmarks.png

dashboard.png

data/PROSYM.rda

data/allGOterms.rda

data/humrna.rda

data/minicorpus.rda

data/packDesc2019.rda

data/packDesc2021.rda

data/packDesc2022.rda

data/packDesc2023.rda

data/stopWords.rda

inst/app/extcl.rda

inst/app/server.R inst/app/ui.R

inst/extdata/hpca.csv

inst/extdata/old.tsv

inst/extdata/pbmc3k_8grp.tsv

inst/obo/PRonto.head

inst/obo/cellontobo.head

inst/obo/cellosaurusobo.head

inst/obo/chebiliteobo.head

inst/obo/cloobo.head

inst/obo/efoobo.head

inst/obo/hcaobo.head

inst/obo/oncotree.head

inst/obo/pato.obo.head

inst/ontoRda/cellOnto.rda

inst/ontoRda/co_0718.rda

inst/owl/clowl.head

inst/owl/ordo.owl.gz

inst/scripts/desc.R

inst/scripts/do.py

inst/scripts/newpl.R

inst/scripts/pokePROntoE.syms.hist.txt

ldf.png

ldfToTerm.png

man/CLfeats.Rd man/PROSYM.Rd man/TermSet-class.Rd man/allGOterms.Rd man/ancestors.Rd man/ancestors_names.Rd man/bind_formal_tags.Rd man/c-TermSet-method.Rd man/cellTypeToGO.Rd man/children_names.Rd man/cleanCLOnames.Rd man/common_classes.Rd man/connect_classes.Rd man/ctmarks.Rd man/cyclicSigset.Rd man/demoApp.Rd man/dropStop.Rd man/fastGrep.Rd man/findCommonAncestors.Rd man/getCellOnto.Rd man/getLeavesFromTerm.Rd man/getOnto.Rd man/get_classes.Rd man/get_ordo_owl_path.Rd man/humrna.Rd man/improveNodes.Rd man/labels.owlents.Rd man/ldfToTerms.Rd man/liberalMap.Rd man/makeSelectInput.Rd man/make_graphNEL_from_ontology_plot.Rd man/map2prose.Rd man/mapOneNaive.Rd man/minicorpus.Rd man/nomenCheckup.Rd man/onto_plot2.Rd man/onto_roots.Rd man/owl2cache.Rd man/packDesc2019.Rd man/packDesc2021.Rd man/packDesc2022.Rd man/packDesc2023.Rd man/parents.Rd man/plot.owlents.Rd man/print.owlents.Rd man/recognizedPredicates.Rd man/secLevGen.Rd man/selectFromMap.Rd man/setup_entities.Rd man/seur3kTab.Rd man/siblings_TAG.Rd man/stopWords.Rd man/sub-.owlents.Rd man/subclasses.Rd man/subset_descendants.Rd man/sym2CellOnto.Rd man/url_ok.Rd man/valid_ontonames.Rd tests/test.R tests/testthat/testAll.R tests/testthat/testNew.R

usecaseCyclic.png

vignettes/GRIK3table.png

vignettes/ctmarks.png

vignettes/dashboard.png

vignettes/hdoasth.png

vignettes/ldf.png

vignettes/ldfToTerm.png

vignettes/ontoProc.Rmd

vignettes/ontobib.bib

vignettes/owlents.Rmd

vignettes/usecaseCyclic.png

vjcitn/ontoProc documentation built on March 23, 2024, 7:23 a.m.