selectFromMap: select a set of elements from a term 'map' and return a...

In vjcitn/ontoProc: processing of ontologies of anatomy, cell lines, and so on

select a set of elements from a term 'map' and return a contribution to a data.frame

Description

select a set of elements from a term 'map' and return a contribution to a data.frame

Usage

selectFromMap(namedvec, index)

Arguments

namedvec	named character vector, as returned from mapOneNaive
index	numeric() or integer(), typically of length one

Value

a data.frame; if index does not inherit from numeric, a data.frame of one row with columns 'ontoid' and 'term' populated with NA_character_ is returned, otherwise a similarly named data.frame is returned with contents from the selected elements of namedvec

Examples

#co = ontoProc::getCellOnto()
co = getOnto("cellOnto", year_added="2023")
mast = mapOneNaive("astrocyte", co)
selectFromMap(mast, 1)

vjcitn/ontoProc documentation built on Oct. 12, 2024, 4:35 p.m.