API for vladpetyuk/vp.misc
Miscellaneous functions used by Vlad Petyuk for proteomics data analysis

Global functions
blue.colors Man page Source code
colorschemes Man page
concatenate_by_features Man page Source code
correct_batch_effect Man page Source code
cv_round Source code
dist Man page Source code
dusk.colors Man page Source code
eset_lm Man page Source code
eset_lm_one_pass Source code
eset_lm_shuffled Source code
eset_presence_absence Man page Source code
exhaustive_ratios Man page Source code
get_knn Source code
heatmap.3 Man page Source code
heatmap.plus.2 Man page Source code
hot.colors Man page Source code
hot2.colors Man page Source code
image_msnset Man page Source code
image_msnset_old Source code
impute_one Source code
jet.colors Man page Source code
jet2.colors Man page Source code
knn_imputation Man page Source code
limma_a_b Man page Source code
limma_gen Source code
lm_for_one Source code
loocv_foreach Source code
loocv_mclapply Source code
loocv_onethread Source code
lr_cv_round Source code
lr_modeling Man page Source code
ls.objects Source code
lsos Source code
make.unique.2 Man page Source code
mixed_effects_anova Man page Source code
msnset Man page
msnset2txt Man page Source code
normalizeByGlob Man page Source code
normalizeByRef Man page Source code
normalize_by_feature_property Man page Source code
oca.set Man page
picketPlot2 Source code
plotAUC Man page Source code
plot_annHeatmap2 Man page Source code
plot_diagnostics Source code
plot_feature Man page Source code
plot_pca_v1 Man page Source code
plot_pca_v2 Man page Source code
plot_pca_v3 Man page Source code
readMaxQuantProtGroups Man page Man page Source code
readSkyLinePRR Man page Source code
remove_covariate Man page Source code
rf_modeling Man page Source code
rrollup Man page Source code
rrollup_a_feature_set Source code
select_features_Boruta Source code
select_features_lasso Source code
select_features_top Source code
select_features_varSelRF Source code
subset_by_size Man page Source code
train_model_lr Source code
train_model_rf Source code
volcano_plot Man page Source code
xtable2 Man page Source code
vladpetyuk/vp.misc documentation built on June 11, 2018, 4:52 a.m.