getMDFR.FisheryQuantities: Get estimated/predicted fishery-related quantities from...

Description Usage Arguments Details Value

Description

Function to get estimated/predicted fishery-related quantities from several model runs.

Usage

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getMDFR.FisheryQuantities(obj, type = c("bio.retm", "bio.dscm", "bio.totm",
  "prNatZ.ret", "prNatZ.tot", "PRs.ret", "PRs.tot", "mnPrNatZ.ret",
  "mnPrNatZ.tot", "sel_cxz", "sel_yxz", "ret_yxz", "zscores.tot", "zscores.ret",
  "effSS.ret", "effSS.tot", "qFsh_xy", "maxFc_xy", "max rates", "mean rates"),
  ci = 0.8, pdfType = c("norm2", "normal", "lognormal"), verbose = FALSE)

Arguments

obj

- object that can be converted into a list of tcsam2013.resLst objects

type

- fishery-related quantity to retrieve

ci

- confidence interval for error bars on observations

pdfType

- type of error distribution for observations

verbose

- flag (T/F) to print debug info

Details

Potential values for 'type' are:

Requires sqldf package.

Value

dataframe in canonical format


wStockhausen/rTCSAM2013 documentation built on May 3, 2019, 7:13 p.m.