plotSizeCompsComparisons2: DEPRECATED: Plot comparisons of model and data size...

In wStockhausen/rTCSAM2015: A set of tools to set up input for, and interact with output from, a TCSAM2015 model run, as well as to compare TCSAM2015 and rsimTCSAM runs.

Description

DEPRECATED: Function to plot comparisons of model and data size compositions by year for specified sexes. USE: compareModels.Fits.NatZData(...) and compareModels.ZScores.NatZData(...).

Usage

plotSizeCompsComparisons2(name, od, md, label = "", disAggBy = c("sx", "ms",
  "sc"), normalize = TRUE, normBy = NULL, ggtheme = theme_grey(),
  ncol = 2, nrow = 5, showPlot = FALSE)

Arguments

name	- name of size comps source
od	- observed size comps list object (may be NULL)
md	- model (predicted) size comps list object (may be NULL)
label	- label for title
disAggBy	- vector of categories to keep disaggregated ('sx','ms',and/or 'sc') or NULL to aggregate over all
normalize	- flag (T/F) to normalize size comps
normBy	- vector of categories to normalize by ('sx','ms',and/or 'sc') or NULL to normalize over all
ggtheme	- ggplot2 theme to use
ncol	- number of columns per page for plots
nrow	- number of rows per page for plots
showPlot	- flag (T/F) to show plots immediately

Details

Maturity/shell condition combinations for a given year x sex combination are distinguished by different colors.

Value

list of ggplot objects comprising the graph pages to plot

wStockhausen/rTCSAM2015 documentation built on May 3, 2019, 7:14 p.m.