plotSpB: Plot time series of TCSAM 2014 model spawning biomass

In wStockhausen/rTCSAM2015: A set of tools to set up input for, and interact with output from, a TCSAM2015 model run, as well as to compare TCSAM2015 and rsimTCSAM runs.

Description

Plots the spawning biomass time series from a TCSAM 2014 model run.

Usage

plotSpB(res, logscale = FALSE, xlab = "model year",
  ylab = "spawning biomass (1000's t)", xlim = NULL, ylim = NULL,
  clr = c("red", "blue"), pts.plot = TRUE, pts.type = 21, pts.siz = 8,
  line.plot = TRUE, line.wd = 2, line.type = c(2, 1), overplot = FALSE)

Arguments

res	- results object from TCSM 2014 model output
logscale	- flag (T/F) to plot on ln-scale
xlab	- x axis title
ylab	- y axis title
xlim	- x axis limits
ylim	- y axis limits
clr	- line/points color
pts.plot	- flag (T/F) to plot points
pts.type	- type of point to plot (pch from 'par')
pts.siz	- point size
line.plot	- flag (T/F) to plot line
line.wd	- line width (lwd from par)
line.type	- type of line (lty from 'par')
overplot	- flag (T/F) to plot the data on an existing plot

Details

Plots spawning biomass by sex across years in the model run. Characteristics for points and lines (clr, type, and siz/wd) can be vectors.

wStockhausen/rTCSAM2015 documentation built on May 3, 2019, 7:14 p.m.