plot_abundance_per_step: compares the (relative) abundance for each step
In welch16/microbiome.onglab: Wrapper functions to run dada2 with htCondor
Description
Usage
Arguments
Value
Description
compares the (relative) abundance for each step
Usage
1
plot_abundance_per_step(nreads_summary, summary_fun = median, relative = FALSE)
Arguments
nreads_summary
output of the summarize_number_reads function
summary_fun
function used to summarize the trend,
the default function is the median
relative
boolean indicator determining wheter comparing the
relative abundance
Value
a ggplot object
welch16/microbiome.onglab documentation built on March 12, 2020, 3:08 a.m.
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Description Usage Arguments Value
Description
compares the (relative) abundance for each step
Usage
1 | plot_abundance_per_step(nreads_summary, summary_fun = median, relative = FALSE)
|
Arguments
nreads_summary |
output of the |
summary_fun |
function used to summarize the trend,
the default function is the |
relative |
boolean indicator determining wheter comparing the relative abundance |
Value
a ggplot object
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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