plot_quality_profiles: plots the quality profiles generated by dada2's...
In welch16/microbiome.onglab: Wrapper functions to run dada2 with htCondor
Description
plots the quality profiles generated by dada2's
plotQualityProfile function, both ends per page, and all samples in a
single pdf file
Usage
1
plot_quality_profiles(sample_tibble, pdf_filename)
Arguments
sample_tibble
a tibble / data.frame with 3 columns:
sample_name | end 1 file | end 2 file
pdf_filename
a string with the name of the file where the plots are
saved
welch16/microbiome.onglab documentation built on March 12, 2020, 3:08 a.m.
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Description
plots the quality profiles generated by dada2's
plotQualityProfile function, both ends per page, and all samples in a
single pdf file
Usage
1 | plot_quality_profiles(sample_tibble, pdf_filename)
|
Arguments
sample_tibble |
a tibble / data.frame with 3 columns: sample_name | end 1 file | end 2 file |
pdf_filename |
a string with the name of the file where the plots are saved |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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