Description Usage Arguments Value Examples
Filter genes that would not contribute to clustering, because statistically they have a very low contribution
1 | gene_filter2(d, method)
|
d |
Expression matrix with rows as genes and columns as cells |
method |
Filtering method. There are four options: "correlation", "variance", "variance_weight", "shannon_weight" or "none". If "correlation" is used a Pearson correlation value is used with a threshold of 0.8. |
Filtered expression matrix where statistically weak genes are excluded
1 | gene_filter2(quake, "correlation")
|
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.