TSNE-class: TSNE dimensionality reduction on dataset
In wjawaid/bglab: Berthold Gottgens lab scRNA seq
Description
Performed in Matlab - Barnes-Hut fast tSNE algorithm used
Slots
thetaTheta parameter
perplexityPerplexity parameter
NNumber of cells/samples
origDOriginal number of cells/samples
seedRandom seed used, saved for reproducibility
nnErrorThe tSNE nearest neighbour error score
algorithmThe algorithm used e.g. Barnes-Hut
wjawaid/bglab documentation built on May 4, 2019, 6:33 a.m.
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Description
Performed in Matlab - Barnes-Hut fast tSNE algorithm used
Slots
thetaTheta parameter
perplexityPerplexity parameter
NNumber of cells/samples
origDOriginal number of cells/samples
seedRandom seed used, saved for reproducibility
nnErrorThe tSNE nearest neighbour error score
algorithmThe algorithm used e.g. Barnes-Hut
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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