Files in wjawaid/bglab
Berthold Gottgens lab scRNA seq

.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/bglab.R R/class_defs.R R/functions.R R/generics.R R/heatmap.R R/methods.R
R/sysdata.rda
README.Rmd README.md
bglab.Rproj
man/DiffusionMap-class.Rd man/Isomap-class.Rd man/PCA-class.Rd man/SCD-class.Rd man/TSNE-class.Rd man/addPath-SCD-method.Rd man/addPath-reducedDim-method.Rd man/addPath.Rd man/addPheno-SCD-method.Rd man/addPheno.Rd man/applyGaussianKernelwithVariableSigma.Rd man/applyMVP.Rd man/bglab.Rd man/clipboard.Rd man/clustLouvain.Rd man/colorGradient.Rd man/counts-SCD-method.Rd man/diffuse-SCD-method.Rd man/diffuse.Rd man/diffuseMat.Rd man/diffuseMat2.Rd man/diffuseProj.Rd man/dim-SCD-method.Rd man/doDE.Rd man/doDESeq.Rd man/eigenvals-DiffusionMap-method.Rd man/eigenvals-reducedDim-method.Rd man/eigenvals.Rd man/eigenvecs-DiffusionMap-method.Rd man/eigenvecs-reducedDim-method.Rd man/eigenvecs.Rd man/enrichr.Rd man/estSizeFact.Rd man/estSizeFact2.Rd man/excludeCells-SCD-method.Rd man/excludeCells.Rd man/exportToMatlab.Rd man/expressedGene.Rd man/exprs-SCD-method.Rd man/fData-SCD-method.Rd man/facsPlot.Rd man/fastDist.Rd man/filterCell-SCD-method.Rd man/filterCell-set-SCD-logical-method.Rd man/filterCell-set.Rd man/filterCell.Rd man/filterGene-SCD-method.Rd man/filterGene-set-SCD-logical-method.Rd man/filterGene-set.Rd man/filterGene.Rd man/filterQC-SCD-method.Rd man/filterQC-set-SCD-logical-method.Rd man/filterQC-set.Rd man/filterQC.Rd man/findCells.Rd man/findGene.Rd man/findLouvain.Rd man/findPath-SCD-method.Rd man/findPath.Rd man/geneDistribution.Rd man/geneID2Name.Rd man/geneName2id.Rd man/getDiffMap-SCD-method.Rd man/getDiffMap.Rd man/getIsomap-SCD-method.Rd man/getIsomap.Rd man/getMST-SCD-method.Rd man/getMST-reducedDim-method.Rd man/getMST.Rd man/getMVP.Rd man/getPCA-SCD-method.Rd man/getPCA.Rd man/getPaths-reducedDim-method.Rd man/getPaths.Rd man/getTSNE-SCD-method.Rd man/getTSNE.Rd man/ggCol.Rd man/heatmap.gottgens.Rd man/heatmap.minus.Rd man/initialize-SCD-method.Rd man/listEnrichrDbs.Rd man/loadings-PCA-method.Rd man/logVarGenes.Rd man/markFailedQC-SCD-method.Rd man/markFailedQC.Rd man/markGOI.Rd man/memls.Rd man/mst-SCD-method.Rd man/mst-reducedDim-method.Rd man/mst.Rd man/multiGenes.Rd man/neatLabels.Rd man/newSCD.Rd man/orderFrame.Rd man/pData-SCD-method.Rd man/performQC-SCD-method.Rd man/performQC.Rd man/plot-SCD-ANY-method.Rd man/plot3-reducedDim-method.Rd man/plot3.Rd man/plotGene.Rd man/plotGeneProfile.Rd man/plotLegend.Rd man/plotPath3-reducedDim-method.Rd man/plotPath3.Rd man/plotQC.Rd man/plotTechVar.Rd man/plotTree3.Rd man/prepData.Rd man/printEnrich.Rd man/printGene.Rd man/qc-SCD-method.Rd man/qc.Rd man/qcFunc.Rd man/read.qPCR.Rd man/reducedDim-class.Rd man/removePath-SCD-method.Rd man/removePath-reducedDim-method.Rd man/removePath.Rd man/resetCells.Rd man/runPCA-SCD-method.Rd man/runPCA.Rd man/runTSNE-SCD-method.Rd man/runTSNE.Rd man/selectCells-SCD-method.Rd man/selectCells.Rd man/selectVariableGenes-SCD-method.Rd man/selectVariableGenes.Rd man/selectionTray.Rd man/sf-SCD-method.Rd man/sf-set-SCD-character-matrix-method.Rd man/sf-set.Rd man/sf.Rd man/slidingAv.Rd man/smoothGn.Rd man/sparseMarkov.Rd man/spikes-SCD-method.Rd man/spikes.Rd man/submap.Rd man/techVar-SCD-method.Rd man/techVar.Rd man/techVarSub.Rd man/useFilter-SCD-method.Rd man/useFilter-set-SCD-logical-method.Rd man/useFilter-set.Rd man/useFilter.Rd man/winsor.Rd man/writeGeneList.Rd
wjawaid/bglab documentation built on May 28, 2017, 4:35 a.m.