plotTechVar: Plots a technical noise analysis plot

In wjawaid/bglab: Berthold Gottgens lab scRNA seq

Description

Plots a technical noise analysis plot

Usage

plotTechVar(varGenes, pdf = NULL, pch = 20, pch.var = pch,
  pch.notvar = pch, pch.spike = pch, ...)

Arguments

varGenes	Object returned from techVar() function
pdf	Default NULL. If anything other than NULL will produce a pdf of that name.
pch	Default 20. Point type to use in plot, if specific points are not defined. See below. Parameter is plossed to base R plot function
pch.var	Defaults to pch above if not defined. Point type for highly variable genes.
pch.notvar	Defaults to pch above if not defined. Point type for not highly variable genes.
pch.spike	Defaults to pch above if not defined. Point type for spike-ins.
...	Further parameters to pass to plot

Details

Plots a technical noise analysis plot

Value

Produces a plot.

Author(s)

Wajid Jawaid

wjawaid/bglab documentation built on May 4, 2019, 6:33 a.m.