ContrastsInterface: Base class for all Contrasts classes

In wolski/prolfqua: Proteomics Label Free Quantification

Base class for all Contrasts classes

Description

Base class for all Contrasts classes

Base class for all Contrasts classes

Methods

Public methods

• ContrastsInterface$get_contrast_sides()

• ContrastsInterface$get_contrasts()

• ContrastsInterface$get_Plotter()

• ContrastsInterface$to_wide()

• ContrastsInterface$column_description()

• ContrastsInterface$clone()

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Method get_contrast_sides()

get table with sides of the contrast

Usage

ContrastsInterface$get_contrast_sides()

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Method get_contrasts()

get table with contrast results (similar to limma topTable function)

Usage

ContrastsInterface$get_contrasts()

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Method get_Plotter()

initialize plotter

Usage

ContrastsInterface$get_Plotter()

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Method to_wide()

create wide representation of data.

Usage

ContrastsInterface$to_wide()

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Method column_description()

column description

Usage

ContrastsInterface$column_description()

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Method clone()

The objects of this class are cloneable with this method.

Usage

ContrastsInterface$clone(deep = FALSE)

Arguments

deep

Whether to make a deep clone.

Examples

int <- ContrastsInterface$new()
testthat::expect_error(int$get_contrast_sides())
testthat::expect_error(int$get_contrasts())
testthat::expect_error(int$get_Plotter())
testthat::expect_error(int$to_wide())
int$column_description()

wolski/prolfqua documentation built on Oct. 31, 2024, 9:22 a.m.