filter_byQValue: Filter data by individual and experiment wide thresholds
In wolski/prolfqua: Proteomics Label Free Quantification
View source: R/tidyMS_R6_TransitionCorrelations.R
filter_byQValue R Documentation
Filter data by individual and experiment wide thresholds
Description
employs parameters ident_qValue, qVal_minNumber_below_experiment_threshold,
qVal_individual_threshold and qVal_experiment_threshold
Usage
filter_byQValue(pdata, config)
Examples
dd <- prolfqua_data('data_spectronautDIA250_A')
config <- dd$config_f()
analysis <- dd$analysis(dd$data,config)
summarize_hierarchy(analysis, config)
res <- filter_byQValue(analysis, config)
summarize_hierarchy(res, config)
wolski/prolfqua documentation built on Sept. 7, 2024, 3:06 a.m.
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View source: R/tidyMS_R6_TransitionCorrelations.R
| filter_byQValue | R Documentation |
Filter data by individual and experiment wide thresholds
Description
employs parameters ident_qValue, qVal_minNumber_below_experiment_threshold, qVal_individual_threshold and qVal_experiment_threshold
Usage
filter_byQValue(pdata, config)
Examples
dd <- prolfqua_data('data_spectronautDIA250_A')
config <- dd$config_f()
analysis <- dd$analysis(dd$data,config)
summarize_hierarchy(analysis, config)
res <- filter_byQValue(analysis, config)
summarize_hierarchy(res, config)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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