complete_cases: Complete cases

In wolski/prolfqua: Proteomics Label Free Quantification

Complete cases

Description

The tidy table does not need to contain missing data. This function re-establishes the missing observations in a sample.

Usage

complete_cases(pdata, config)

Arguments

pdata	data.frame
config	AnlalysisConfiguration

See Also

Other configuration: AnalysisConfiguration, AnalysisParameters, AnalysisTableAnnotation, INTERNAL_FUNCTIONS_BY_FAMILY, R6_extract_values(), concrete_AnalysisConfiguration, make_interaction_column(), make_reduced_hierarchy_config(), sample_subset(), separate_factors(), separate_hierarchy(), setup_analysis(), spread_response_by_IsotopeLabel(), table_factors()

Examples

bb <- prolfqua_data('data_ionstar')$filtered()
bb$config <- old2new(bb$config)

stopifnot(nrow(bb$data) == 25780)
config <- bb$config$clone(deep=TRUE)
data <- bb$data

xx <- complete_cases(data, config)
stopifnot(nrow(data) <= nrow(xx))

wolski/prolfqua documentation built on May 2, 2024, 7:23 p.m.