PlotPhylogeneticTree: Function to prepare data for phylogenetic tree.

In xia-lab/MicrobiomeAnalystR: MicrobiomeAnalystR - A comprehensive R package for statistical, visual, and functional analysis of the microbiome.

Function to prepare data for phylogenetic tree.

Description

This functions prepares the data to plot the phylogenetic tree.

Usage

PlotPhylogeneticTree(
  mbSetObj,
  color,
  shape,
  taxa,
  treeshape,
  imgName,
  format = "png",
  dpi = 72
)

Arguments

mbSetObj	Input the name of the mbSetObj.
format	Character, input the preferred format of the plot. By default it is set to "png".
dpi	Numeric, input the dots per inch. By default it is set to 72.

Author(s)

Jeff Xia [e-mail] McGill University, Canada License: GNU GPL (>= 2)

xia-lab/MicrobiomeAnalystR documentation built on April 17, 2024, 7:45 p.m.