PlotSamplePieGraph: Main function to plot sample-wise pie graphs of microbiome...

Description Usage Arguments Author(s)

View source: R/mdp_utils.R

Description

This functions plots sample-wise pie graphs of microbiome data.

Usage

1
PlotSamplePieGraph(mbSetObj, taxalvl, smplnm, feat_cnt)

Arguments

mbSetObj

Input the name of the mbSetObj.

taxalvl

Character, input the taxonomic level to perform classification. For instance, "Genus" to use the Genus level.

feat_cnt

Set the minimum feature count that is used to "bin" together small taxa.

Author(s)

Jeff Xia [email protected] McGill University, Canada License: GNU GPL (>= 2)


xia-lab/MicrobiomeAnalystR documentation built on Oct. 17, 2019, 9:05 a.m.