SanityCheckMetData: Function to sanity check on uploaded metabolomics data
In xia-lab/MicrobiomeAnalystR: MicrobiomeAnalystR - A comprehensive R package for statistical, visual, and functional analysis of the microbiome.
SanityCheckMetData R Documentation
Function to sanity check on uploaded metabolomics data
Description
This function performs a sanity check on the uploaded
user data. It checks the grouping of samples, if a phylogenetic tree
was uploaded.
Usage
SanityCheckMetData(mbSetObj, isNormMetInput, disableFilter = FALSE)
Arguments
mbSetObj
Input the name of the mbSetObj.
disableFilter
Booleanmetabo. Set to TRUE to bypass the hard-coded filter
to remove features occuring in <2 samples.
Author(s)
Jeff Xia jeff.xia@mcgill.ca
McGill University, Canada
License: GNU GPL (>= 2)
xia-lab/MicrobiomeAnalystR documentation built on April 17, 2024, 7:45 p.m.
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| SanityCheckMetData | R Documentation |
Function to sanity check on uploaded metabolomics data
Description
This function performs a sanity check on the uploaded user data. It checks the grouping of samples, if a phylogenetic tree was uploaded.
Usage
SanityCheckMetData(mbSetObj, isNormMetInput, disableFilter = FALSE)
Arguments
mbSetObj |
Input the name of the mbSetObj. |
disableFilter |
Booleanmetabo. Set to TRUE to bypass the hard-coded filter to remove features occuring in <2 samples. |
Author(s)
Jeff Xia jeff.xia@mcgill.ca McGill University, Canada License: GNU GPL (>= 2)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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