DAISIE_calc_clade_clado_rate: Calculate the clade-wide cladogenesis rate.

In xieshu95/Trait_dependent_TraiSIE: Dynamical Assembly of Islands by Speciation, Immigration and Extinction

Description

Calculate the clade-wide cladogenesis rate.

Usage

DAISIE_calc_clade_clado_rate(ps_clado_rate, n_species, carr_cap)

Arguments

ps_clado_rate	per species cladogenesis rate
n_species	number of species in that clade
carr_cap	carrying capacity, number of species this clade will grow to

Value

the clade's cladogenesis rate, which is at least zero. This rate will be zero if there are more species than the carrying capacity allows for

Note

For clade-specific carrying capacity, each clade is simulated seperately in DAISIE_sim

Author(s)

Richel J.C. Bilderbeek

Examples

  testit::assert(
    DAISIE_calc_clade_clado_rate(
      ps_clado_rate = 0.2,
      n_species = 5,
      carr_cap = 10
    ) == 0.5
  )
  testit::assert(
    DAISIE_calc_clade_clado_rate(
      ps_clado_rate = 0.2,
      n_species = 2,
      carr_cap = 1
    ) == 0.0
  )

xieshu95/Trait_dependent_TraiSIE documentation built on Nov. 22, 2019, 7:51 a.m.