DAISIE_plot_extinction: Plots extinction rate function through time

In xieshu95/Trait_dependent_TraiSIE: Dynamical Assembly of Islands by Speciation, Immigration and Extinction

Description

Plots extinction rate function through time

Usage

DAISIE_plot_extinction(totaltime, K, Apars, Epars,
  island_ontogeny = "beta", removed_timepoints, resolution)

Arguments

totaltime	total time of simulation
K	K (clade-level carrying capacity)
Apars	a named list containing area parameters: [1]: maximum area [2]: value from 0 to 1 indicating where in the island's history the peak area is achieved [3]: sharpness of peak [4]: total island age
Epars	a numeric vector: [1]: minimum extinction when area is at peak [2]: extinction rate when current area is 0.10 of maximum area
island_ontogeny	a string describing the type of island ontogeny. Can be NULL, beta for a beta function describing area through time, or linear for a linear function
removed_timepoints	starting position of time vector
resolution	resolution of time axis

Value

per capita extinction rate through time plot and dataframe with extinction at corresponding time

Author(s)

Pedro Neves

xieshu95/Trait_dependent_TraiSIE documentation built on Nov. 22, 2019, 7:51 a.m.