compare_diff: Comparing simulated results from DAISIE and TRASIE

Description Usage Arguments See Also

View source: R/DAISIE_compare.R

Description

Comparing simulated results from DAISIE and TRASIE

Usage

1
2
compare_diff(DAISIE_output, TRASIE_output1, TRASIE_output2, TRASIE_output3,
  Tpars1, Tpars2, Tpars3)

Arguments

DAISIE_output

List with simulation output from general DAISIE DAISIE_sim

TRASIE_output1

List with simulation output using TRASIE pars DAISIE_sim

TRASIE_output2

List with simulation output using TRASIE pars DAISIE_sim

TRASIE_output3

List with simulation output using TRASIE pars DAISIE_sim

Tpars1

A named list containing diversification rates considering two trait states:

  • [1]:A numeric with the per capita transition rate with state1

  • [2]:A numeric with the per capita immigration rate with state2

  • [3]:A numeric with the per capita extinction rate with state2

  • [4]:A numeric with the per capita anagenesis rate with state2

  • [5]:A numeric with the per capita cladogenesis rate with state2

  • [6]:A numeric with the per capita transition rate with state2

  • [7]:A carrying capacity with trait state 2 on mainland

  • [8]:A numeric with the number of species with trait state 2 on mainland

Tpars2

A named list containing diversification rates considering two trait states:

Tpars3

A named list containing diversification rates considering two trait states:

See Also

DAISIE_sim, DAISIE_convert_to_classic_plot

Other plotting: DAISIE_plot_comparison_stts


xieshu95/Trait_dependent_TraiSIE documentation built on Nov. 22, 2019, 7:51 a.m.