inspector: Data inspection plotting functions.

Description Usage Arguments

Description

Data inspection plotting functions.

Usage

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inspector(mat, annot, subset = rownames(mat), outdir = getwd(),
  prefix = NULL)

Arguments

mat

numeric matrix with measures per feature and sample, with samples in the columns and features in the rows

annot

data frame with annotation to be plotted.

subset

a vector with feature identifiers to cluster samples on a limited number of features

outdir

path to output the plots; if 'NULL' then the PCA is printed in the current open device

prefix

prefix of the filename to save the file


xpastor/skima documentation built on May 16, 2019, 3:25 p.m.