InitBrendaDeprecatedEntry: Create a 'brenda.deprecated.entry' object.
In y1zhou/brendaDb: The BRENDA Enzyme Database

InitBrendaDeprecatedEntry

R Documentation

Create a `brenda.deprecated.entry` object.

Description

Some EC numbers are transferred or deleted. For these entries, return a brenda.deprecated.entry object and the corresponding message.

Usage

InitBrendaDeprecatedEntry(EC, msg)

is.brenda.deprecated.entry(x)

Arguments

`EC`	A string indicating EC number of the enzyme.
`msg`	A string of the transferred / deleted message.
`x`	Any object.

Details

is.brenda.deprecated.entry checks if an object is a brenda.deprecated.entry object. If the input is a brenda.entries object, check all items in the list to see if they are brenda.deprecated.entry objects and return a boolean vector of the same length.

Value

A brenda.deprecated.entry obeject.

A boolean vector of the same length as x.

Examples

brendaDb:::InitBrendaDeprecatedEntry("6.3.5.8", "Transferred to EC 2.6.1.85")
df <- ReadBrenda(system.file("extdata", "brenda_download_test.txt",
                          package = "brendaDb"))
is.brenda.entry(QueryBrenda(df, "6.3.5.8"))

y1zhou/brendaDb documentation built on Dec. 12, 2022, 3:43 a.m.