QueryBrendaBase: Query for a specific enzyme.

Description Usage Arguments Value See Also Examples

View source: R/query.R

Description

Use a EC number to retrieve information from the BRENDA tibble read in by ReadBrenda().

Usage

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QueryBrendaBase(brenda, EC, organisms = FALSE)

Arguments

brenda

A tibble containing information from BRENDA.

EC

A string of the EC number.

organisms

A character vector indicating organisms to keep. Default is FALSE, which would keep all organisms.

Value

A brenda.entry object.

See Also

ReadBrenda() InitBrendaEntry()

Examples

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df <- ReadBrenda(system.file("extdata", "brenda_download_test.txt",
                          package = "brendaDb"))
brendaDb:::QueryBrendaBase(brenda = df, EC = "1.1.1.1",
                           organisms = "Homo sapiens")

y1zhou/brendaDb documentation built on Aug. 2, 2021, 12:02 a.m.